Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ythdf1P59326 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ythdf1P59326 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.31■□□□□ 0.52
Ythdf1P59326 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.3■□□□□ 0.52
Ythdf1P59326 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ythdf1P59326 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ythdf1P59326 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.3■□□□□ 0.52
Ythdf1P59326 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.3■□□□□ 0.52
Ythdf1P59326 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ythdf1P59326 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Ythdf1P59326 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ythdf1P59326 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.29■□□□□ 0.52
Ythdf1P59326 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ythdf1P59326 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ythdf1P59326 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.29■□□□□ 0.52
Ythdf1P59326 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ythdf1P59326 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.28■□□□□ 0.52
Ythdf1P59326 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ythdf1P59326 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ythdf1P59326 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ythdf1P59326 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ythdf1P59326 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ythdf1P59326 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ythdf1P59326 Gm10420-201ENSMUST00000121713 882 ntBASIC18.27■□□□□ 0.52
Ythdf1P59326 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ythdf1P59326 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.27■□□□□ 0.52
Ythdf1P59326 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ythdf1P59326 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ythdf1P59326 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ythdf1P59326 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.26■□□□□ 0.51
Ythdf1P59326 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.26■□□□□ 0.51
Ythdf1P59326 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.26■□□□□ 0.51
Ythdf1P59326 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ythdf1P59326 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ythdf1P59326 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ythdf1P59326 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ythdf1P59326 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ythdf1P59326 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Ythdf1P59326 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ythdf1P59326 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ythdf1P59326 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ythdf1P59326 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ythdf1P59326 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.24■□□□□ 0.51
Ythdf1P59326 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ythdf1P59326 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.24■□□□□ 0.51
Ythdf1P59326 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ythdf1P59326 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.24■□□□□ 0.51
Ythdf1P59326 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ythdf1P59326 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ythdf1P59326 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ythdf1P59326 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.23■□□□□ 0.51
Ythdf1P59326 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.23■□□□□ 0.51
Ythdf1P59326 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ythdf1P59326 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ythdf1P59326 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms