Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Golph3-202ENSMUST00000226517 2359 ntBASIC19.12■□□□□ 0.65
SmoP56726 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SmoP56726 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.11■□□□□ 0.65
SmoP56726 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SmoP56726 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.1■□□□□ 0.65
SmoP56726 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.1■□□□□ 0.65
SmoP56726 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.1■□□□□ 0.65
SmoP56726 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SmoP56726 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SmoP56726 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.09■□□□□ 0.65
SmoP56726 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.09■□□□□ 0.65
SmoP56726 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.09■□□□□ 0.65
SmoP56726 Gm6365-201ENSMUST00000054711 744 ntBASIC19.09■□□□□ 0.65
SmoP56726 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.09■□□□□ 0.65
SmoP56726 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SmoP56726 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SmoP56726 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SmoP56726 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SmoP56726 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SmoP56726 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SmoP56726 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SmoP56726 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SmoP56726 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SmoP56726 Gm10602-201ENSMUST00000098239 609 ntBASIC19.08■□□□□ 0.64
SmoP56726 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SmoP56726 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SmoP56726 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SmoP56726 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.07■□□□□ 0.64
SmoP56726 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.07■□□□□ 0.64
SmoP56726 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.07■□□□□ 0.64
SmoP56726 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SmoP56726 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SmoP56726 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.07■□□□□ 0.64
SmoP56726 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SmoP56726 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SmoP56726 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SmoP56726 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SmoP56726 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SmoP56726 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
SmoP56726 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
SmoP56726 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SmoP56726 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Mir5133-201ENSMUST00000174955 77 ntBASIC19.05■□□□□ 0.64
SmoP56726 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SmoP56726 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms