Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcs2P54869 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcs2P54869 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcs2P54869 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcs2P54869 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hmgcs2P54869 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcs2P54869 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.24■□□□□ 0.99
Hmgcs2P54869 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hmgcs2P54869 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmgcs2P54869 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Gm5643-201ENSMUST00000117081 966 ntBASIC21.22■□□□□ 0.99
Hmgcs2P54869 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcs2P54869 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcs2P54869 Dio3-201ENSMUST00000097228 1449 ntBASIC21.21■□□□□ 0.99
Hmgcs2P54869 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcs2P54869 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcs2P54869 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.19■□□□□ 0.98
Hmgcs2P54869 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcs2P54869 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hmgcs2P54869 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcs2P54869 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hmgcs2P54869 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hmgcs2P54869 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.17■□□□□ 0.98
Hmgcs2P54869 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcs2P54869 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.17■□□□□ 0.98
Hmgcs2P54869 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgcs2P54869 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.16■□□□□ 0.98
Hmgcs2P54869 Gm44549-201ENSMUST00000208351 577 ntBASIC21.16■□□□□ 0.98
Hmgcs2P54869 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgcs2P54869 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmgcs2P54869 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcs2P54869 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.15■□□□□ 0.98
Hmgcs2P54869 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Hmgcs2P54869 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcs2P54869 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcs2P54869 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
Hmgcs2P54869 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcs2P54869 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgcs2P54869 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.14■□□□□ 0.98
Hmgcs2P54869 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.14■□□□□ 0.97
Hmgcs2P54869 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgcs2P54869 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms