Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Gm27275-201ENSMUST00000184318 272 ntBASIC18.82■□□□□ 0.6
Atxn1P54254 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.81■□□□□ 0.6
Atxn1P54254 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Gm715-201ENSMUST00000117865 831 ntBASIC18.81■□□□□ 0.6
Atxn1P54254 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.81■□□□□ 0.6
Atxn1P54254 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Atxn1P54254 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atxn1P54254 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.8■□□□□ 0.6
Atxn1P54254 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atxn1P54254 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atxn1P54254 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atxn1P54254 Iqck-206ENSMUST00000208658 2891 ntBASIC18.8■□□□□ 0.6
Atxn1P54254 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atxn1P54254 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Atxn1P54254 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Atxn1P54254 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atxn1P54254 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atxn1P54254 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.79■□□□□ 0.6
Atxn1P54254 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atxn1P54254 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atxn1P54254 Gm38205-201ENSMUST00000192243 258 ntBASIC18.79■□□□□ 0.6
Atxn1P54254 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.79■□□□□ 0.6
Atxn1P54254 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atxn1P54254 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atxn1P54254 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atxn1P54254 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atxn1P54254 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atxn1P54254 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
Atxn1P54254 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atxn1P54254 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atxn1P54254 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Gm15565-201ENSMUST00000118890 427 ntBASIC18.78■□□□□ 0.6
Atxn1P54254 Gm26524-201ENSMUST00000192339 390 ntBASIC18.78■□□□□ 0.6
Atxn1P54254 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atxn1P54254 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Atxn1P54254 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atxn1P54254 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.78■□□□□ 0.6
Atxn1P54254 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Atxn1P54254 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.77■□□□□ 0.6
Atxn1P54254 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atxn1P54254 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Atxn1P54254 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atxn1P54254 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.76■□□□□ 0.59
Atxn1P54254 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atxn1P54254 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atxn1P54254 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atxn1P54254 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Atxn1P54254 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atxn1P54254 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atxn1P54254 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.75■□□□□ 0.59
Atxn1P54254 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atxn1P54254 Gm11643-201ENSMUST00000119578 864 ntBASIC18.75■□□□□ 0.59
Atxn1P54254 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.75■□□□□ 0.59
Atxn1P54254 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.75■□□□□ 0.59
Atxn1P54254 Rab3c-203ENSMUST00000224180 967 ntBASIC18.75■□□□□ 0.59
Atxn1P54254 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Atxn1P54254 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms