Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fdft1P53798 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Fdft1P53798 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fdft1P53798 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fdft1P53798 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fdft1P53798 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Fdft1P53798 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fdft1P53798 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.86■□□□□ 0.61
Fdft1P53798 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Fdft1P53798 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.85■□□□□ 0.61
Fdft1P53798 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.85■□□□□ 0.61
Fdft1P53798 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Fdft1P53798 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.85■□□□□ 0.61
Fdft1P53798 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Fdft1P53798 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fdft1P53798 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Fdft1P53798 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Fdft1P53798 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Fdft1P53798 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Fdft1P53798 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.84■□□□□ 0.61
Fdft1P53798 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Fdft1P53798 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fdft1P53798 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Fdft1P53798 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Fdft1P53798 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Fdft1P53798 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Fdft1P53798 Gm43017-201ENSMUST00000198296 752 ntBASIC18.83■□□□□ 0.6
Fdft1P53798 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.83■□□□□ 0.6
Fdft1P53798 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Fdft1P53798 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fdft1P53798 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fdft1P53798 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fdft1P53798 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fdft1P53798 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Fdft1P53798 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.82■□□□□ 0.6
Fdft1P53798 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.82■□□□□ 0.6
Fdft1P53798 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fdft1P53798 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fdft1P53798 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fdft1P53798 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Fdft1P53798 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.81■□□□□ 0.6
Fdft1P53798 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fdft1P53798 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fdft1P53798 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fdft1P53798 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.81■□□□□ 0.6
Fdft1P53798 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.81■□□□□ 0.6
Fdft1P53798 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fdft1P53798 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Fdft1P53798 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fdft1P53798 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.81■□□□□ 0.6
Fdft1P53798 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.81■□□□□ 0.6
Fdft1P53798 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Fdft1P53798 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Fdft1P53798 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.8■□□□□ 0.6
Fdft1P53798 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.8■□□□□ 0.6
Fdft1P53798 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Fdft1P53798 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Gm40848-201ENSMUST00000221998 324 ntBASIC18.8■□□□□ 0.6
Fdft1P53798 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fdft1P53798 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms