Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.54■□□□□ 0.4
Ccr4P51680 Gm43173-201ENSMUST00000202246 593 ntBASIC17.54■□□□□ 0.4
Ccr4P51680 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccr4P51680 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr4P51680 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccr4P51680 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ccr4P51680 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccr4P51680 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Ccr4P51680 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ccr4P51680 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ccr4P51680 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccr4P51680 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.53■□□□□ 0.4
Ccr4P51680 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr4P51680 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccr4P51680 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccr4P51680 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Smad6-203ENSMUST00000179458 273 ntBASIC17.52■□□□□ 0.4
Ccr4P51680 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr4P51680 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccr4P51680 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccr4P51680 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr4P51680 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr4P51680 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccr4P51680 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccr4P51680 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.51■□□□□ 0.39
Ccr4P51680 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccr4P51680 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr4P51680 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Ccr4P51680 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.5■□□□□ 0.39
Ccr4P51680 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Gm43017-201ENSMUST00000198296 752 ntBASIC17.5■□□□□ 0.39
Ccr4P51680 Gm40848-201ENSMUST00000221998 324 ntBASIC17.5■□□□□ 0.39
Ccr4P51680 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Gm6139-201ENSMUST00000079261 882 ntBASIC17.5■□□□□ 0.39
Ccr4P51680 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Ccr4P51680 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr4P51680 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccr4P51680 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccr4P51680 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Ccr4P51680 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccr4P51680 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccr4P51680 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Ccr4P51680 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccr4P51680 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccr4P51680 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccr4P51680 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccr4P51680 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccr4P51680 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccr4P51680 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.49■□□□□ 0.39
Ccr4P51680 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccr4P51680 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccr4P51680 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ccr4P51680 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.48■□□□□ 0.39
Ccr4P51680 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ccr4P51680 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccr4P51680 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccr4P51680 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccr4P51680 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccr4P51680 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms