Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx3P50481 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lhx3P50481 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lhx3P50481 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.3■□□□□ 0.68
Lhx3P50481 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.3■□□□□ 0.68
Lhx3P50481 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx3P50481 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx3P50481 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lhx3P50481 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.29■□□□□ 0.68
Lhx3P50481 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.29■□□□□ 0.68
Lhx3P50481 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx3P50481 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx3P50481 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx3P50481 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.29■□□□□ 0.68
Lhx3P50481 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx3P50481 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx3P50481 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lhx3P50481 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx3P50481 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lhx3P50481 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lhx3P50481 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx3P50481 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx3P50481 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Lhx3P50481 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.28■□□□□ 0.68
Lhx3P50481 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx3P50481 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx3P50481 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Lhx3P50481 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lhx3P50481 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lhx3P50481 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.27■□□□□ 0.68
Lhx3P50481 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.27■□□□□ 0.68
Lhx3P50481 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx3P50481 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lhx3P50481 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx3P50481 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lhx3P50481 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lhx3P50481 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Lhx3P50481 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx3P50481 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.25■□□□□ 0.67
Lhx3P50481 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lhx3P50481 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.25■□□□□ 0.67
Lhx3P50481 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.25■□□□□ 0.67
Lhx3P50481 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Lhx3P50481 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.25■□□□□ 0.67
Lhx3P50481 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx3P50481 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lhx3P50481 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx3P50481 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lhx3P50481 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms