Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
Krt6aP50446 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Krt6aP50446 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Krt6aP50446 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Krt6aP50446 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Krt6aP50446 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt6aP50446 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.79■□□□□ 0.6
Krt6aP50446 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Krt6aP50446 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.79■□□□□ 0.6
Krt6aP50446 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Krt6aP50446 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt6aP50446 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.79■□□□□ 0.6
Krt6aP50446 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Krt6aP50446 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt6aP50446 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt6aP50446 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt6aP50446 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt6aP50446 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt6aP50446 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.78■□□□□ 0.6
Krt6aP50446 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.78■□□□□ 0.6
Krt6aP50446 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Krt6aP50446 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt6aP50446 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.77■□□□□ 0.6
Krt6aP50446 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt6aP50446 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.77■□□□□ 0.6
Krt6aP50446 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt6aP50446 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt6aP50446 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt6aP50446 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.77■□□□□ 0.6
Krt6aP50446 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt6aP50446 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt6aP50446 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt6aP50446 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt6aP50446 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt6aP50446 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt6aP50446 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Krt6aP50446 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt6aP50446 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt6aP50446 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt6aP50446 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Krt6aP50446 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Krt6aP50446 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt6aP50446 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt6aP50446 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt6aP50446 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt6aP50446 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt6aP50446 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.75■□□□□ 0.59
Krt6aP50446 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.75■□□□□ 0.59
Krt6aP50446 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt6aP50446 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt6aP50446 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Krt6aP50446 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.74■□□□□ 0.59
Krt6aP50446 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.74■□□□□ 0.59
Krt6aP50446 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt6aP50446 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Krt6aP50446 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Krt6aP50446 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt6aP50446 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Krt6aP50446 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.73■□□□□ 0.59
Krt6aP50446 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Krt6aP50446 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt6aP50446 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt6aP50446 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt6aP50446 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt6aP50446 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt6aP50446 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt6aP50446 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Krt6aP50446 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms