Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GdnfP48540 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GdnfP48540 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
GdnfP48540 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GdnfP48540 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GdnfP48540 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.53■□□□□ 0.24
GdnfP48540 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.53■□□□□ 0.24
GdnfP48540 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.53■□□□□ 0.24
GdnfP48540 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
GdnfP48540 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GdnfP48540 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.52■□□□□ 0.24
GdnfP48540 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.52■□□□□ 0.24
GdnfP48540 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GdnfP48540 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GdnfP48540 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.52■□□□□ 0.23
GdnfP48540 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GdnfP48540 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GdnfP48540 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.52■□□□□ 0.23
GdnfP48540 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GdnfP48540 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GdnfP48540 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GdnfP48540 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.51■□□□□ 0.23
GdnfP48540 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GdnfP48540 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GdnfP48540 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.51■□□□□ 0.23
GdnfP48540 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GdnfP48540 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GdnfP48540 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.5■□□□□ 0.23
GdnfP48540 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.5■□□□□ 0.23
GdnfP48540 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
GdnfP48540 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
GdnfP48540 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.5■□□□□ 0.23
GdnfP48540 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.5■□□□□ 0.23
GdnfP48540 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GdnfP48540 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.5■□□□□ 0.23
GdnfP48540 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GdnfP48540 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
GdnfP48540 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.5■□□□□ 0.23
GdnfP48540 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GdnfP48540 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.49■□□□□ 0.23
GdnfP48540 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
GdnfP48540 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
GdnfP48540 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms