Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Xcl1P47993 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Xcl1P47993 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Xcl1P47993 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Xcl1P47993 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Xcl1P47993 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Gm13889-201ENSMUST00000099689 1386 ntBASIC12.45□□□□□ -0.42
Xcl1P47993 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Xcl1P47993 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Xcl1P47993 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Gm9812-201ENSMUST00000061934 968 ntBASIC12.44□□□□□ -0.42
Xcl1P47993 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Terc-201ENSMUST00000082862 423 ntBASIC12.44□□□□□ -0.42
Xcl1P47993 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Xcl1P47993 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Xcl1P47993 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.43□□□□□ -0.42
Xcl1P47993 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC12.43□□□□□ -0.42
Xcl1P47993 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.43□□□□□ -0.42
Xcl1P47993 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Xcl1P47993 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.42□□□□□ -0.42
Xcl1P47993 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.42□□□□□ -0.42
Xcl1P47993 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC12.42□□□□□ -0.42
Xcl1P47993 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Xcl1P47993 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Xcl1P47993 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Xcl1P47993 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms