Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rph3aP47708 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rph3aP47708 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rph3aP47708 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rph3aP47708 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.2■□□□□ 0.5
Rph3aP47708 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rph3aP47708 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rph3aP47708 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rph3aP47708 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.2■□□□□ 0.5
Rph3aP47708 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rph3aP47708 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.2■□□□□ 0.5
Rph3aP47708 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.19■□□□□ 0.5
Rph3aP47708 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.19■□□□□ 0.5
Rph3aP47708 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rph3aP47708 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rph3aP47708 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.18■□□□□ 0.5
Rph3aP47708 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.18■□□□□ 0.5
Rph3aP47708 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.18■□□□□ 0.5
Rph3aP47708 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rph3aP47708 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rph3aP47708 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rph3aP47708 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Rph3aP47708 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Rph3aP47708 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rph3aP47708 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Rph3aP47708 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.17■□□□□ 0.5
Rph3aP47708 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rph3aP47708 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rph3aP47708 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rph3aP47708 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.16■□□□□ 0.5
Rph3aP47708 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rph3aP47708 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.16■□□□□ 0.5
Rph3aP47708 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.16■□□□□ 0.5
Rph3aP47708 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rph3aP47708 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rph3aP47708 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rph3aP47708 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rph3aP47708 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Gm15039-201ENSMUST00000118914 875 ntBASIC18.15■□□□□ 0.5
Rph3aP47708 Gm7860-201ENSMUST00000121190 879 ntBASIC18.15■□□□□ 0.5
Rph3aP47708 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.15■□□□□ 0.5
Rph3aP47708 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.15■□□□□ 0.5
Rph3aP47708 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rph3aP47708 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rph3aP47708 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rph3aP47708 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rph3aP47708 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.14■□□□□ 0.49
Rph3aP47708 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms