Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Gdf6P43028 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.03■□□□□ 0.8
Gdf6P43028 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gdf6P43028 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Gdf6P43028 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.02■□□□□ 0.8
Gdf6P43028 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Gdf6P43028 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Gdf6P43028 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gdf6P43028 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gdf6P43028 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gdf6P43028 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.02■□□□□ 0.8
Gdf6P43028 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Gdf6P43028 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gdf6P43028 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gdf6P43028 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gdf6P43028 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Gdf6P43028 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gdf6P43028 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gdf6P43028 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gdf6P43028 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Gdf6P43028 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.01■□□□□ 0.79
Gdf6P43028 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.01■□□□□ 0.79
Gdf6P43028 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gdf6P43028 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gdf6P43028 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20■□□□□ 0.79
Gdf6P43028 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20■□□□□ 0.79
Gdf6P43028 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Gdf6P43028 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gdf6P43028 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Gdf6P43028 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.99■□□□□ 0.79
Gdf6P43028 Gm10653-202ENSMUST00000139570 835 ntBASIC19.99■□□□□ 0.79
Gdf6P43028 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.99■□□□□ 0.79
Gdf6P43028 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Gdf6P43028 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Gdf6P43028 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gdf6P43028 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.98■□□□□ 0.79
Gdf6P43028 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.98■□□□□ 0.79
Gdf6P43028 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Gdf6P43028 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gdf6P43028 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gdf6P43028 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gdf6P43028 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gdf6P43028 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Gdf6P43028 Gm12527-201ENSMUST00000117967 564 ntBASIC19.97■□□□□ 0.79
Gdf6P43028 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.97■□□□□ 0.79
Gdf6P43028 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gdf6P43028 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gdf6P43028 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
Gdf6P43028 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Gdf6P43028 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gdf6P43028 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.97■□□□□ 0.79
Gdf6P43028 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.96■□□□□ 0.79
Gdf6P43028 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gdf6P43028 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms