Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.02■□□□□ 0.64
Fen1P39749 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fen1P39749 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fen1P39749 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fen1P39749 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Fen1P39749 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Fen1P39749 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Fen1P39749 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Fen1P39749 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Fen1P39749 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.01■□□□□ 0.63
Fen1P39749 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fen1P39749 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Fen1P39749 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Fen1P39749 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fen1P39749 Rarb-207ENSMUST00000225921 2756 ntBASIC18.99■□□□□ 0.63
Fen1P39749 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.99■□□□□ 0.63
Fen1P39749 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
Fen1P39749 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.99■□□□□ 0.63
Fen1P39749 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Fen1P39749 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fen1P39749 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.98■□□□□ 0.63
Fen1P39749 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.98■□□□□ 0.63
Fen1P39749 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Fen1P39749 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
Fen1P39749 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Fen1P39749 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fen1P39749 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.97■□□□□ 0.63
Fen1P39749 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Fen1P39749 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Fen1P39749 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fen1P39749 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Fen1P39749 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Fen1P39749 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.96■□□□□ 0.63
Fen1P39749 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Fen1P39749 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.96■□□□□ 0.63
Fen1P39749 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.96■□□□□ 0.63
Fen1P39749 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fen1P39749 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Fen1P39749 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.95■□□□□ 0.62
Fen1P39749 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms