Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.41■□□□□ 0.86
Mmp3P28862 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.41■□□□□ 0.86
Mmp3P28862 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp3P28862 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp3P28862 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp3P28862 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Mmp3P28862 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.4■□□□□ 0.86
Mmp3P28862 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.4■□□□□ 0.86
Mmp3P28862 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Mmp3P28862 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.4■□□□□ 0.86
Mmp3P28862 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp3P28862 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp3P28862 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp3P28862 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Mmp3P28862 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.39■□□□□ 0.85
Mmp3P28862 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Mmp3P28862 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.39■□□□□ 0.85
Mmp3P28862 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.39■□□□□ 0.85
Mmp3P28862 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.39■□□□□ 0.85
Mmp3P28862 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.39■□□□□ 0.85
Mmp3P28862 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Mmp3P28862 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp3P28862 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp3P28862 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp3P28862 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp3P28862 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp3P28862 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Mmp3P28862 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.38■□□□□ 0.85
Mmp3P28862 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp3P28862 Gm20760-201ENSMUST00000179197 648 ntBASIC20.38■□□□□ 0.85
Mmp3P28862 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp3P28862 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.38■□□□□ 0.85
Mmp3P28862 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.38■□□□□ 0.85
Mmp3P28862 Rab3c-203ENSMUST00000224180 967 ntBASIC20.38■□□□□ 0.85
Mmp3P28862 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp3P28862 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp3P28862 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp3P28862 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.37■□□□□ 0.85
Mmp3P28862 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.37■□□□□ 0.85
Mmp3P28862 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp3P28862 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp3P28862 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.36■□□□□ 0.85
Mmp3P28862 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Mmp3P28862 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Mmp3P28862 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp3P28862 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp3P28862 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp3P28862 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Mmp3P28862 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp3P28862 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mmp3P28862 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp3P28862 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.34■□□□□ 0.85
Mmp3P28862 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.34■□□□□ 0.85
Mmp3P28862 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.34■□□□□ 0.85
Mmp3P28862 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp3P28862 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mmp3P28862 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp3P28862 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp3P28862 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp3P28862 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp3P28862 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms