Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col2a1P28481 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.79■■□□□ 1.08
Col2a1P28481 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.79■■□□□ 1.08
Col2a1P28481 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.79■■□□□ 1.08
Col2a1P28481 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col2a1P28481 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col2a1P28481 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col2a1P28481 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col2a1P28481 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Col2a1P28481 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col2a1P28481 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col2a1P28481 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col2a1P28481 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col2a1P28481 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col2a1P28481 Gm27275-201ENSMUST00000184318 272 ntBASIC21.77■■□□□ 1.08
Col2a1P28481 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.77■■□□□ 1.08
Col2a1P28481 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col2a1P28481 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col2a1P28481 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col2a1P28481 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.77■■□□□ 1.07
Col2a1P28481 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.77■■□□□ 1.07
Col2a1P28481 Gm44549-201ENSMUST00000208351 577 ntBASIC21.77■■□□□ 1.07
Col2a1P28481 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col2a1P28481 Dio3-201ENSMUST00000097228 1449 ntBASIC21.76■■□□□ 1.07
Col2a1P28481 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col2a1P28481 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col2a1P28481 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col2a1P28481 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Col2a1P28481 Gm13168-201ENSMUST00000121771 632 ntBASIC21.76■■□□□ 1.07
Col2a1P28481 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Col2a1P28481 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.76■■□□□ 1.07
Col2a1P28481 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col2a1P28481 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.76■■□□□ 1.07
Col2a1P28481 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Col2a1P28481 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col2a1P28481 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Col2a1P28481 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Col2a1P28481 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Gm22240-201ENSMUST00000175225 82 ntBASIC21.75■■□□□ 1.07
Col2a1P28481 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.75■■□□□ 1.07
Col2a1P28481 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.75■■□□□ 1.07
Col2a1P28481 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col2a1P28481 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Col2a1P28481 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Col2a1P28481 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.74■■□□□ 1.07
Col2a1P28481 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col2a1P28481 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col2a1P28481 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.73■■□□□ 1.07
Col2a1P28481 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Col2a1P28481 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col2a1P28481 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.72■■□□□ 1.07
Col2a1P28481 Gm12896-201ENSMUST00000118430 226 ntBASIC21.72■■□□□ 1.07
Col2a1P28481 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.72■■□□□ 1.07
Col2a1P28481 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.72■■□□□ 1.07
Col2a1P28481 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col2a1P28481 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col2a1P28481 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col2a1P28481 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col2a1P28481 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col2a1P28481 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.71■■□□□ 1.07
Col2a1P28481 Gm2559-201ENSMUST00000201323 363 ntBASIC21.71■■□□□ 1.07
Col2a1P28481 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col2a1P28481 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Col2a1P28481 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col2a1P28481 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.71■■□□□ 1.07
Col2a1P28481 Golph3-202ENSMUST00000226517 2359 ntBASIC21.71■■□□□ 1.07
Col2a1P28481 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Col2a1P28481 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col2a1P28481 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Col2a1P28481 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col2a1P28481 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col2a1P28481 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col2a1P28481 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col2a1P28481 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col2a1P28481 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Col2a1P28481 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col2a1P28481 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col2a1P28481 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col2a1P28481 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.69■■□□□ 1.06
Col2a1P28481 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.69■■□□□ 1.06
Col2a1P28481 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.69■■□□□ 1.06
Col2a1P28481 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col2a1P28481 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col2a1P28481 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.68■■□□□ 1.06
Col2a1P28481 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Col2a1P28481 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms