Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.43■□□□□ 0.38
Cd40lgP27548 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40lgP27548 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40lgP27548 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.42■□□□□ 0.38
Cd40lgP27548 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cd40lgP27548 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40lgP27548 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40lgP27548 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40lgP27548 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.42■□□□□ 0.38
Cd40lgP27548 Gm9988-201ENSMUST00000069786 435 ntBASIC17.42■□□□□ 0.38
Cd40lgP27548 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cd40lgP27548 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd40lgP27548 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cd40lgP27548 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd40lgP27548 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cd40lgP27548 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Cd40lgP27548 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd40lgP27548 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.41■□□□□ 0.38
Cd40lgP27548 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cd40lgP27548 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd40lgP27548 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Cd40lgP27548 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Cd40lgP27548 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.4■□□□□ 0.38
Cd40lgP27548 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.4■□□□□ 0.38
Cd40lgP27548 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.4■□□□□ 0.38
Cd40lgP27548 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.4■□□□□ 0.38
Cd40lgP27548 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd40lgP27548 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.4■□□□□ 0.38
Cd40lgP27548 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.4■□□□□ 0.38
Cd40lgP27548 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.39■□□□□ 0.38
Cd40lgP27548 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.39■□□□□ 0.38
Cd40lgP27548 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cd40lgP27548 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cd40lgP27548 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.39■□□□□ 0.37
Cd40lgP27548 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.39■□□□□ 0.37
Cd40lgP27548 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd40lgP27548 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Cd40lgP27548 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd40lgP27548 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cd40lgP27548 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cd40lgP27548 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.38■□□□□ 0.37
Cd40lgP27548 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd40lgP27548 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd40lgP27548 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Cd40lgP27548 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.37■□□□□ 0.37
Cd40lgP27548 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40lgP27548 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40lgP27548 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40lgP27548 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd40lgP27548 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cd40lgP27548 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd40lgP27548 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.36■□□□□ 0.37
Cd40lgP27548 Gm18671-201ENSMUST00000214826 683 ntBASIC17.36■□□□□ 0.37
Cd40lgP27548 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.36■□□□□ 0.37
Cd40lgP27548 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd40lgP27548 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40lgP27548 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40lgP27548 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40lgP27548 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40lgP27548 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40lgP27548 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd40lgP27548 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms