Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.18■□□□□ 0.34
Cd40P27512 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.18■□□□□ 0.34
Cd40P27512 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cd40P27512 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.17■□□□□ 0.34
Cd40P27512 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd40P27512 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cd40P27512 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.16■□□□□ 0.34
Cd40P27512 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Cd40P27512 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd40P27512 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cd40P27512 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cd40P27512 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cd40P27512 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd40P27512 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cd40P27512 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cd40P27512 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd40P27512 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd40P27512 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd40P27512 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cd40P27512 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd40P27512 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd40P27512 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Cd40P27512 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Gm10033-202ENSMUST00000211874 928 ntBASIC17.13■□□□□ 0.33
Cd40P27512 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cd40P27512 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.13■□□□□ 0.33
Cd40P27512 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd40P27512 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd40P27512 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd40P27512 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cd40P27512 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd40P27512 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
Cd40P27512 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Gm42642-201ENSMUST00000200683 355 ntBASIC17.12■□□□□ 0.33
Cd40P27512 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Gm18671-201ENSMUST00000214826 683 ntBASIC17.12■□□□□ 0.33
Cd40P27512 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cd40P27512 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd40P27512 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd40P27512 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.11■□□□□ 0.33
Cd40P27512 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms