Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VimP20152 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VimP20152 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VimP20152 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VimP20152 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.31■□□□□ 0.68
VimP20152 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
VimP20152 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VimP20152 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.3■□□□□ 0.68
VimP20152 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VimP20152 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VimP20152 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VimP20152 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VimP20152 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VimP20152 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Gm7332-201ENSMUST00000118351 454 ntBASIC19.29■□□□□ 0.68
VimP20152 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
VimP20152 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VimP20152 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VimP20152 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.28■□□□□ 0.68
VimP20152 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VimP20152 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VimP20152 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VimP20152 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.27■□□□□ 0.68
VimP20152 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VimP20152 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.27■□□□□ 0.67
VimP20152 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VimP20152 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VimP20152 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
VimP20152 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.26■□□□□ 0.67
VimP20152 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VimP20152 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VimP20152 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
VimP20152 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VimP20152 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VimP20152 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.25■□□□□ 0.67
VimP20152 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.25■□□□□ 0.67
VimP20152 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.24■□□□□ 0.67
VimP20152 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VimP20152 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
VimP20152 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VimP20152 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VimP20152 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VimP20152 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.24■□□□□ 0.67
VimP20152 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VimP20152 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VimP20152 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.24■□□□□ 0.67
VimP20152 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VimP20152 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VimP20152 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.24■□□□□ 0.67
VimP20152 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VimP20152 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VimP20152 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.23■□□□□ 0.67
VimP20152 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms