Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Hmgn1P18608 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hmgn1P18608 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Hmgn1P18608 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.35■□□□□ 0.37
Hmgn1P18608 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hmgn1P18608 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.35■□□□□ 0.37
Hmgn1P18608 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
Hmgn1P18608 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgn1P18608 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgn1P18608 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmgn1P18608 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgn1P18608 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmgn1P18608 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.34■□□□□ 0.37
Hmgn1P18608 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.34■□□□□ 0.37
Hmgn1P18608 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.34■□□□□ 0.37
Hmgn1P18608 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgn1P18608 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgn1P18608 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgn1P18608 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgn1P18608 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgn1P18608 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgn1P18608 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
Hmgn1P18608 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgn1P18608 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmgn1P18608 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn1P18608 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmgn1P18608 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn1P18608 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn1P18608 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.32■□□□□ 0.36
Hmgn1P18608 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.32■□□□□ 0.36
Hmgn1P18608 Rarb-207ENSMUST00000225921 2756 ntBASIC17.32■□□□□ 0.36
Hmgn1P18608 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Hmgn1P18608 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hmgn1P18608 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.32■□□□□ 0.36
Hmgn1P18608 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.32■□□□□ 0.36
Hmgn1P18608 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn1P18608 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.32■□□□□ 0.36
Hmgn1P18608 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmgn1P18608 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmgn1P18608 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn1P18608 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgn1P18608 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgn1P18608 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgn1P18608 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.3■□□□□ 0.36
Hmgn1P18608 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hmgn1P18608 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn1P18608 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn1P18608 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmgn1P18608 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.29■□□□□ 0.36
Hmgn1P18608 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn1P18608 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hmgn1P18608 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn1P18608 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.29■□□□□ 0.36
Hmgn1P18608 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.29■□□□□ 0.36
Hmgn1P18608 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn1P18608 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms