Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cdx1P18111 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdx1P18111 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdx1P18111 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.21■□□□□ 0.03
Cdx1P18111 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdx1P18111 Golgb1-201ENSMUST00000023534 498 ntBASIC15.21■□□□□ 0.03
Cdx1P18111 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.21■□□□□ 0.03
Cdx1P18111 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdx1P18111 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdx1P18111 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdx1P18111 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.2■□□□□ 0.02
Cdx1P18111 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdx1P18111 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.2■□□□□ 0.02
Cdx1P18111 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx1P18111 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.19■□□□□ 0.02
Cdx1P18111 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdx1P18111 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.19■□□□□ 0.02
Cdx1P18111 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdx1P18111 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdx1P18111 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdx1P18111 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx1P18111 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdx1P18111 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.18■□□□□ 0.02
Cdx1P18111 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cdx1P18111 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cdx1P18111 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx1P18111 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdx1P18111 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdx1P18111 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdx1P18111 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdx1P18111 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdx1P18111 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cdx1P18111 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdx1P18111 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx1P18111 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.16■□□□□ 0.02
Cdx1P18111 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdx1P18111 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdx1P18111 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.16■□□□□ 0.02
Cdx1P18111 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdx1P18111 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdx1P18111 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdx1P18111 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdx1P18111 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdx1P18111 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdx1P18111 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms