Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Cd44P15379 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd44P15379 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd44P15379 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd44P15379 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cd44P15379 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cd44P15379 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.95■□□□□ 0.78
Cd44P15379 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.95■□□□□ 0.78
Cd44P15379 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cd44P15379 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.95■□□□□ 0.78
Cd44P15379 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd44P15379 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cd44P15379 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.94■□□□□ 0.78
Cd44P15379 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.94■□□□□ 0.78
Cd44P15379 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd44P15379 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cd44P15379 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.93■□□□□ 0.78
Cd44P15379 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.93■□□□□ 0.78
Cd44P15379 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.93■□□□□ 0.78
Cd44P15379 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd44P15379 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd44P15379 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
Cd44P15379 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cd44P15379 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd44P15379 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd44P15379 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cd44P15379 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.92■□□□□ 0.78
Cd44P15379 Gm43137-201ENSMUST00000198052 594 ntBASIC19.92■□□□□ 0.78
Cd44P15379 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.92■□□□□ 0.78
Cd44P15379 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd44P15379 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.92■□□□□ 0.78
Cd44P15379 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cd44P15379 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cd44P15379 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cd44P15379 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.91■□□□□ 0.78
Cd44P15379 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.91■□□□□ 0.78
Cd44P15379 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd44P15379 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.9■□□□□ 0.78
Cd44P15379 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.9■□□□□ 0.78
Cd44P15379 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cd44P15379 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd44P15379 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.9■□□□□ 0.78
Cd44P15379 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cd44P15379 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cd44P15379 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.89■□□□□ 0.77
Cd44P15379 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd44P15379 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cd44P15379 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms