Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Hoxc6P10629 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc6P10629 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc6P10629 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Hoxc6P10629 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hoxc6P10629 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.16■□□□□ 0.98
Hoxc6P10629 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc6P10629 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc6P10629 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hoxc6P10629 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Hoxc6P10629 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.16■□□□□ 0.98
Hoxc6P10629 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc6P10629 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc6P10629 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hoxc6P10629 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc6P10629 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.15■□□□□ 0.98
Hoxc6P10629 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc6P10629 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.15■□□□□ 0.98
Hoxc6P10629 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc6P10629 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.15■□□□□ 0.98
Hoxc6P10629 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.15■□□□□ 0.98
Hoxc6P10629 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc6P10629 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc6P10629 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc6P10629 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc6P10629 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc6P10629 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc6P10629 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hoxc6P10629 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc6P10629 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc6P10629 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc6P10629 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc6P10629 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc6P10629 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc6P10629 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxc6P10629 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Hoxc6P10629 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Gm11249-201ENSMUST00000117071 859 ntBASIC21.13■□□□□ 0.97
Hoxc6P10629 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hoxc6P10629 Gm13836-201ENSMUST00000121159 501 ntBASIC21.13■□□□□ 0.97
Hoxc6P10629 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hoxc6P10629 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc6P10629 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hoxc6P10629 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.12■□□□□ 0.97
Hoxc6P10629 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Gm715-201ENSMUST00000117865 831 ntBASIC21.12■□□□□ 0.97
Hoxc6P10629 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Gm18666-201ENSMUST00000190039 958 ntBASIC21.12■□□□□ 0.97
Hoxc6P10629 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.12■□□□□ 0.97
Hoxc6P10629 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc6P10629 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.11■□□□□ 0.97
Hoxc6P10629 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.11■□□□□ 0.97
Hoxc6P10629 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.11■□□□□ 0.97
Hoxc6P10629 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.11■□□□□ 0.97
Hoxc6P10629 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc6P10629 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc6P10629 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Hoxc6P10629 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc6P10629 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc6P10629 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.1■□□□□ 0.97
Hoxc6P10629 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc6P10629 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc6P10629 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc6P10629 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.09■□□□□ 0.97
Hoxc6P10629 Gm10698-201ENSMUST00000182663 604 ntBASIC21.09■□□□□ 0.97
Hoxc6P10629 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc6P10629 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc6P10629 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc6P10629 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hoxc6P10629 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hoxc6P10629 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxc6P10629 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.08■□□□□ 0.97
Hoxc6P10629 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxc6P10629 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms