Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccl1P10146 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccl1P10146 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.74□□□□□ -0.05
Ccl1P10146 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccl1P10146 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ccl1P10146 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccl1P10146 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccl1P10146 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccl1P10146 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.73□□□□□ -0.05
Ccl1P10146 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccl1P10146 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.73□□□□□ -0.05
Ccl1P10146 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccl1P10146 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ccl1P10146 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccl1P10146 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.73□□□□□ -0.05
Ccl1P10146 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Ccl1P10146 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccl1P10146 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccl1P10146 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.72□□□□□ -0.05
Ccl1P10146 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ccl1P10146 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl1P10146 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccl1P10146 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ccl1P10146 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.71□□□□□ -0.05
Ccl1P10146 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.71□□□□□ -0.05
Ccl1P10146 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl1P10146 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ccl1P10146 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl1P10146 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl1P10146 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl1P10146 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.7□□□□□ -0.06
Ccl1P10146 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ccl1P10146 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ccl1P10146 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Gm10399-202ENSMUST00000202768 748 ntBASIC14.7□□□□□ -0.06
Ccl1P10146 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ccl1P10146 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ccl1P10146 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl1P10146 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.69□□□□□ -0.06
Ccl1P10146 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms