Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.47■□□□□ 0.23
PtcraP0C6B2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PtcraP0C6B2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PtcraP0C6B2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PtcraP0C6B2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.46■□□□□ 0.23
PtcraP0C6B2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PtcraP0C6B2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.46■□□□□ 0.23
PtcraP0C6B2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.46■□□□□ 0.23
PtcraP0C6B2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PtcraP0C6B2 Gm9988-201ENSMUST00000069786 435 ntBASIC16.46■□□□□ 0.23
PtcraP0C6B2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PtcraP0C6B2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PtcraP0C6B2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PtcraP0C6B2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Gm13234-201ENSMUST00000120010 747 ntBASIC16.45■□□□□ 0.22
PtcraP0C6B2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.45■□□□□ 0.22
PtcraP0C6B2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
PtcraP0C6B2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.44■□□□□ 0.22
PtcraP0C6B2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.43■□□□□ 0.22
PtcraP0C6B2 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.43■□□□□ 0.22
PtcraP0C6B2 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.43■□□□□ 0.22
PtcraP0C6B2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Reep4-203ENSMUST00000226563 1444 ntBASIC16.43■□□□□ 0.22
PtcraP0C6B2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PtcraP0C6B2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PtcraP0C6B2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PtcraP0C6B2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PtcraP0C6B2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms