Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sod1P08228 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.96■□□□□ 0.47
Sod1P08228 Gm11249-201ENSMUST00000117071 859 ntBASIC17.96■□□□□ 0.47
Sod1P08228 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sod1P08228 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.96■□□□□ 0.47
Sod1P08228 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Sod1P08228 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sod1P08228 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sod1P08228 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sod1P08228 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sod1P08228 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sod1P08228 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Sod1P08228 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Mir7071-201ENSMUST00000184847 69 ntBASIC17.94■□□□□ 0.46
Sod1P08228 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.94■□□□□ 0.46
Sod1P08228 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Sod1P08228 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.94■□□□□ 0.46
Sod1P08228 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sod1P08228 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.93■□□□□ 0.46
Sod1P08228 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.93■□□□□ 0.46
Sod1P08228 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.93■□□□□ 0.46
Sod1P08228 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sod1P08228 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sod1P08228 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.92■□□□□ 0.46
Sod1P08228 Mir6982-201ENSMUST00000184354 68 ntBASIC17.92■□□□□ 0.46
Sod1P08228 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.92■□□□□ 0.46
Sod1P08228 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sod1P08228 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sod1P08228 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.92■□□□□ 0.46
Sod1P08228 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.92■□□□□ 0.46
Sod1P08228 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sod1P08228 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sod1P08228 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sod1P08228 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.92■□□□□ 0.46
Sod1P08228 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Sod1P08228 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sod1P08228 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sod1P08228 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.91■□□□□ 0.46
Sod1P08228 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sod1P08228 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.91■□□□□ 0.46
Sod1P08228 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.91■□□□□ 0.46
Sod1P08228 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sod1P08228 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Sod1P08228 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sod1P08228 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.9■□□□□ 0.46
Sod1P08228 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sod1P08228 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sod1P08228 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms