Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxa4P06798 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.72■□□□□ 0.59
Hoxa4P06798 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa4P06798 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hoxa4P06798 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa4P06798 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.72■□□□□ 0.59
Hoxa4P06798 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa4P06798 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa4P06798 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa4P06798 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hoxa4P06798 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa4P06798 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa4P06798 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa4P06798 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.71■□□□□ 0.59
Hoxa4P06798 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa4P06798 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hoxa4P06798 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa4P06798 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa4P06798 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Hoxa4P06798 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hoxa4P06798 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.7■□□□□ 0.58
Hoxa4P06798 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Gm37179-201ENSMUST00000194862 823 ntBASIC18.7■□□□□ 0.58
Hoxa4P06798 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.7■□□□□ 0.58
Hoxa4P06798 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Hoxa4P06798 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa4P06798 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hoxa4P06798 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hoxa4P06798 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hoxa4P06798 Gm6420-201ENSMUST00000193885 723 ntBASIC18.69■□□□□ 0.58
Hoxa4P06798 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.69■□□□□ 0.58
Hoxa4P06798 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hoxa4P06798 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa4P06798 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hoxa4P06798 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hoxa4P06798 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxa4P06798 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.68■□□□□ 0.58
Hoxa4P06798 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.68■□□□□ 0.58
Hoxa4P06798 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxa4P06798 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.68■□□□□ 0.58
Hoxa4P06798 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa4P06798 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa4P06798 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Hoxa4P06798 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.67■□□□□ 0.58
Hoxa4P06798 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa4P06798 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.67■□□□□ 0.58
Hoxa4P06798 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa4P06798 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa4P06798 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa4P06798 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.67■□□□□ 0.58
Hoxa4P06798 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.66■□□□□ 0.58
Hoxa4P06798 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxa4P06798 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hoxa4P06798 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa4P06798 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa4P06798 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hoxa4P06798 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa4P06798 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.65■□□□□ 0.58
Hoxa4P06798 Gm7290-201ENSMUST00000104990 617 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa4P06798 Gm12933-201ENSMUST00000120203 872 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Gm12918-201ENSMUST00000120234 636 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Gm15710-201ENSMUST00000121821 636 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Gm5075-201ENSMUST00000196916 622 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxa4P06798 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms