Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
P04946 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.33■□□□□ 0.2
P04946 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04946 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
P04946 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
P04946 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04946 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
P04946 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04946 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04946 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P04946 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Gm12441-201ENSMUST00000121806 588 ntBASIC16.32■□□□□ 0.2
P04946 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.32■□□□□ 0.2
P04946 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.32■□□□□ 0.2
P04946 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.32■□□□□ 0.2
P04946 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04946 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04946 Gm4968-201ENSMUST00000071458 858 ntBASIC16.32■□□□□ 0.2
P04946 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04946 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.31■□□□□ 0.2
P04946 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
P04946 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
P04946 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04946 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
P04946 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
P04946 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
P04946 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04946 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
P04946 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.29■□□□□ 0.2
P04946 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.29■□□□□ 0.2
P04946 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.29■□□□□ 0.2
P04946 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04946 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P04946 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.28■□□□□ 0.2
P04946 Gm5408-201ENSMUST00000197998 747 ntBASIC16.28■□□□□ 0.2
P04946 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P04946 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P04946 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P04946 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04946 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.27■□□□□ 0.2
P04946 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
P04946 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04946 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04946 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04946 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04946 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04946 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.27■□□□□ 0.2
P04946 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.27■□□□□ 0.2
P04946 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.27■□□□□ 0.2
P04946 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.27■□□□□ 0.2
P04946 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04946 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
P04946 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms