Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.61■□□□□ 0.25
P04224 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.61■□□□□ 0.25
P04224 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P04224 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
P04224 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.6■□□□□ 0.25
P04224 Gm7143-201ENSMUST00000222811 859 ntBASIC16.6■□□□□ 0.25
P04224 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.6■□□□□ 0.25
P04224 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
P04224 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
P04224 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04224 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
P04224 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
P04224 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
P04224 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
P04224 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04224 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
P04224 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
P04224 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
P04224 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04224 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
P04224 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
P04224 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
P04224 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
P04224 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04224 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
P04224 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04224 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P04224 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.56■□□□□ 0.24
P04224 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P04224 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.56■□□□□ 0.24
P04224 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.56■□□□□ 0.24
P04224 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.56■□□□□ 0.24
P04224 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.56■□□□□ 0.24
P04224 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.56■□□□□ 0.24
P04224 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04224 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
P04224 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04224 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms