Protein–RNA interactions for Protein: P01796

Ig heavy chain V-III region A4, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01796 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P01796 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
P01796 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
P01796 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
P01796 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.73■□□□□ 0.11
P01796 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.73■□□□□ 0.11
P01796 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.73■□□□□ 0.11
P01796 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
P01796 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.73■□□□□ 0.11
P01796 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.73■□□□□ 0.11
P01796 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
P01796 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
P01796 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01796 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
P01796 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01796 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
P01796 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
P01796 AV356131-201ENSMUST00000206201 750 ntBASIC15.71■□□□□ 0.11
P01796 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
P01796 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01796 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
P01796 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.7■□□□□ 0.1
P01796 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.7■□□□□ 0.1
P01796 Gm26571-201ENSMUST00000181399 666 ntBASIC15.7■□□□□ 0.1
P01796 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01796 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
P01796 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.69■□□□□ 0.1
P01796 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.69■□□□□ 0.1
P01796 Gm27801-201ENSMUST00000184174 223 ntBASIC15.69■□□□□ 0.1
P01796 Gm10033-202ENSMUST00000211874 928 ntBASIC15.69■□□□□ 0.1
P01796 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01796 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.68■□□□□ 0.1
P01796 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.68■□□□□ 0.1
P01796 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P01796 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Gm29257-201ENSMUST00000186115 639 ntBASIC15.68■□□□□ 0.1
P01796 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
P01796 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
P01796 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01796 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
P01796 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01796 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P01796 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P01796 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P01796 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms