Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
ShdO88834 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ShdO88834 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShdO88834 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ShdO88834 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.39■□□□□ 0.7
ShdO88834 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.39■□□□□ 0.7
ShdO88834 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ShdO88834 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ShdO88834 Gm38205-201ENSMUST00000192243 258 ntBASIC19.39■□□□□ 0.69
ShdO88834 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShdO88834 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShdO88834 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
ShdO88834 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ShdO88834 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShdO88834 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ShdO88834 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
ShdO88834 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ShdO88834 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ShdO88834 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShdO88834 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ShdO88834 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.37■□□□□ 0.69
ShdO88834 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ShdO88834 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShdO88834 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.36■□□□□ 0.69
ShdO88834 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ShdO88834 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.36■□□□□ 0.69
ShdO88834 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Gm18284-201ENSMUST00000172604 624 ntBASIC19.36■□□□□ 0.69
ShdO88834 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.36■□□□□ 0.69
ShdO88834 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShdO88834 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.35■□□□□ 0.69
ShdO88834 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.35■□□□□ 0.69
ShdO88834 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ShdO88834 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.35■□□□□ 0.69
ShdO88834 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.35■□□□□ 0.69
ShdO88834 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.35■□□□□ 0.69
ShdO88834 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ShdO88834 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShdO88834 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ShdO88834 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.34■□□□□ 0.69
ShdO88834 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.34■□□□□ 0.69
ShdO88834 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ShdO88834 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.34■□□□□ 0.69
ShdO88834 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShdO88834 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShdO88834 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShdO88834 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ShdO88834 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShdO88834 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShdO88834 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
ShdO88834 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShdO88834 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ShdO88834 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.33■□□□□ 0.68
ShdO88834 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.33■□□□□ 0.68
ShdO88834 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ShdO88834 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShdO88834 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms