Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc28a2O88627 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc28a2O88627 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc28a2O88627 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc28a2O88627 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc28a2O88627 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Slc28a2O88627 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Slc28a2O88627 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Slc28a2O88627 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.8■□□□□ 0.28
Slc28a2O88627 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc28a2O88627 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Slc28a2O88627 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc28a2O88627 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc28a2O88627 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.79■□□□□ 0.28
Slc28a2O88627 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc28a2O88627 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.79■□□□□ 0.28
Slc28a2O88627 Gm21956-201ENSMUST00000179946 522 ntBASIC16.79■□□□□ 0.28
Slc28a2O88627 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.79■□□□□ 0.28
Slc28a2O88627 Gm43137-201ENSMUST00000198052 594 ntBASIC16.79■□□□□ 0.28
Slc28a2O88627 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc28a2O88627 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc28a2O88627 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.78■□□□□ 0.28
Slc28a2O88627 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slc28a2O88627 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc28a2O88627 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Slc28a2O88627 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Slc28a2O88627 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc28a2O88627 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc28a2O88627 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc28a2O88627 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc28a2O88627 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc28a2O88627 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.77■□□□□ 0.27
Slc28a2O88627 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc28a2O88627 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc28a2O88627 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.76■□□□□ 0.27
Slc28a2O88627 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Slc28a2O88627 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Slc28a2O88627 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Slc28a2O88627 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc28a2O88627 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc28a2O88627 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms