Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cldn1O88551 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cldn1O88551 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cldn1O88551 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn1O88551 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Cldn1O88551 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.18■□□□□ 0.18
Cldn1O88551 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldn1O88551 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn1O88551 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Cldn1O88551 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn1O88551 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.17■□□□□ 0.18
Cldn1O88551 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn1O88551 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn1O88551 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn1O88551 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cldn1O88551 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn1O88551 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn1O88551 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cldn1O88551 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cldn1O88551 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Cldn1O88551 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.16■□□□□ 0.18
Cldn1O88551 Gm27275-201ENSMUST00000184318 272 ntBASIC16.16■□□□□ 0.18
Cldn1O88551 Gm26524-201ENSMUST00000192339 390 ntBASIC16.16■□□□□ 0.18
Cldn1O88551 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.16■□□□□ 0.18
Cldn1O88551 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.16■□□□□ 0.18
Cldn1O88551 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cldn1O88551 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn1O88551 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.15■□□□□ 0.18
Cldn1O88551 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cldn1O88551 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cldn1O88551 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cldn1O88551 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.15■□□□□ 0.18
Cldn1O88551 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cldn1O88551 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cldn1O88551 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.15■□□□□ 0.18
Cldn1O88551 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cldn1O88551 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cldn1O88551 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn1O88551 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cldn1O88551 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Cldn1O88551 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.14■□□□□ 0.17
Cldn1O88551 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn1O88551 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn1O88551 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn1O88551 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn1O88551 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn1O88551 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cldn1O88551 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn1O88551 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cldn1O88551 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.13■□□□□ 0.17
Cldn1O88551 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.13■□□□□ 0.17
Cldn1O88551 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms