Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cops3O88543 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Cops3O88543 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.93■□□□□ 0.3
Cops3O88543 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.93■□□□□ 0.3
Cops3O88543 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cops3O88543 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.92■□□□□ 0.3
Cops3O88543 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cops3O88543 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cops3O88543 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cops3O88543 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cops3O88543 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cops3O88543 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Rarb-207ENSMUST00000225921 2756 ntBASIC16.91■□□□□ 0.3
Cops3O88543 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.91■□□□□ 0.3
Cops3O88543 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cops3O88543 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.91■□□□□ 0.3
Cops3O88543 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cops3O88543 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops3O88543 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.91■□□□□ 0.3
Cops3O88543 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops3O88543 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
Cops3O88543 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.89■□□□□ 0.29
Cops3O88543 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.89■□□□□ 0.29
Cops3O88543 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.89■□□□□ 0.29
Cops3O88543 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Cops3O88543 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops3O88543 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.88■□□□□ 0.29
Cops3O88543 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Gm12922-201ENSMUST00000120626 809 ntBASIC16.88■□□□□ 0.29
Cops3O88543 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.88■□□□□ 0.29
Cops3O88543 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Cops3O88543 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops3O88543 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.88■□□□□ 0.29
Cops3O88543 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cops3O88543 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops3O88543 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms