Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf17O88472 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf17O88472 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf17O88472 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf17O88472 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.66■□□□□ 0.42
Tnfrsf17O88472 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.66■□□□□ 0.42
Tnfrsf17O88472 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Tnfrsf17O88472 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf17O88472 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnfrsf17O88472 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf17O88472 AA386476-201ENSMUST00000098781 1665 ntBASIC17.64■□□□□ 0.41
Tnfrsf17O88472 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf17O88472 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms