Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1hO88427 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cacna1hO88427 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cacna1hO88427 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1hO88427 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1hO88427 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1hO88427 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1hO88427 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1hO88427 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1hO88427 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1hO88427 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1hO88427 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1hO88427 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1hO88427 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.62■□□□□ 0.57
Cacna1hO88427 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1hO88427 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1hO88427 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1hO88427 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1hO88427 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.61■□□□□ 0.57
Cacna1hO88427 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Gm7284-201ENSMUST00000131667 944 ntBASIC18.61■□□□□ 0.57
Cacna1hO88427 Timm23-208ENSMUST00000226683 750 ntBASIC18.61■□□□□ 0.57
Cacna1hO88427 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1hO88427 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cacna1hO88427 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.6■□□□□ 0.57
Cacna1hO88427 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cacna1hO88427 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cacna1hO88427 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cacna1hO88427 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1hO88427 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.59■□□□□ 0.57
Cacna1hO88427 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.59■□□□□ 0.57
Cacna1hO88427 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cacna1hO88427 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.59■□□□□ 0.57
Cacna1hO88427 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1hO88427 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.59■□□□□ 0.57
Cacna1hO88427 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1hO88427 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1hO88427 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1hO88427 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1hO88427 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1hO88427 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1hO88427 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1hO88427 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1hO88427 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1hO88427 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1hO88427 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.57■□□□□ 0.56
Cacna1hO88427 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.57■□□□□ 0.56
Cacna1hO88427 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1hO88427 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1hO88427 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cacna1hO88427 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1hO88427 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1hO88427 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.57■□□□□ 0.56
Cacna1hO88427 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1hO88427 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.57■□□□□ 0.56
Cacna1hO88427 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.57■□□□□ 0.56
Cacna1hO88427 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1hO88427 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1hO88427 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cacna1hO88427 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cacna1hO88427 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cacna1hO88427 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cacna1hO88427 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cacna1hO88427 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Cacna1hO88427 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms