Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tulp3O88413 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tulp3O88413 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tulp3O88413 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.68■□□□□ 0.42
Tulp3O88413 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tulp3O88413 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.68■□□□□ 0.42
Tulp3O88413 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tulp3O88413 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tulp3O88413 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
Tulp3O88413 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.67■□□□□ 0.42
Tulp3O88413 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.67■□□□□ 0.42
Tulp3O88413 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.67■□□□□ 0.42
Tulp3O88413 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tulp3O88413 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tulp3O88413 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tulp3O88413 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Tulp3O88413 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Gm22238-201ENSMUST00000175222 88 ntBASIC17.66■□□□□ 0.42
Tulp3O88413 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Tulp3O88413 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tulp3O88413 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.66■□□□□ 0.42
Tulp3O88413 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tulp3O88413 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.65■□□□□ 0.42
Tulp3O88413 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tulp3O88413 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tulp3O88413 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Serp2-204ENSMUST00000228055 705 ntBASIC17.65■□□□□ 0.42
Tulp3O88413 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tulp3O88413 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tulp3O88413 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tulp3O88413 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tulp3O88413 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Tulp3O88413 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.64■□□□□ 0.41
Tulp3O88413 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tulp3O88413 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tulp3O88413 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tulp3O88413 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tulp3O88413 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.62■□□□□ 0.41
Tulp3O88413 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.62■□□□□ 0.41
Tulp3O88413 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.62■□□□□ 0.41
Tulp3O88413 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tulp3O88413 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms