Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd46O88174 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd46O88174 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd46O88174 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd46O88174 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.13■□□□□ 0.33
Cd46O88174 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd46O88174 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd46O88174 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd46O88174 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cd46O88174 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd46O88174 Gm27275-201ENSMUST00000184318 272 ntBASIC17.12■□□□□ 0.33
Cd46O88174 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.12■□□□□ 0.33
Cd46O88174 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cd46O88174 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cd46O88174 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd46O88174 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd46O88174 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd46O88174 Gm22325-201ENSMUST00000158904 308 ntBASIC17.11■□□□□ 0.33
Cd46O88174 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.11■□□□□ 0.33
Cd46O88174 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cd46O88174 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.11■□□□□ 0.33
Cd46O88174 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd46O88174 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd46O88174 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd46O88174 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd46O88174 Mir6982-201ENSMUST00000184354 68 ntBASIC17.1■□□□□ 0.33
Cd46O88174 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd46O88174 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.1■□□□□ 0.33
Cd46O88174 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.1■□□□□ 0.33
Cd46O88174 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd46O88174 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd46O88174 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cd46O88174 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd46O88174 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd46O88174 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd46O88174 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd46O88174 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd46O88174 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cd46O88174 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd46O88174 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.09■□□□□ 0.33
Cd46O88174 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cd46O88174 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd46O88174 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd46O88174 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd46O88174 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cd46O88174 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
Cd46O88174 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd46O88174 Gm12896-201ENSMUST00000118430 226 ntBASIC17.08■□□□□ 0.32
Cd46O88174 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.08■□□□□ 0.32
Cd46O88174 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd46O88174 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd46O88174 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd46O88174 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd46O88174 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cd46O88174 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Cd46O88174 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Cd46O88174 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd46O88174 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Gm5643-201ENSMUST00000117081 966 ntBASIC17.07■□□□□ 0.32
Cd46O88174 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cd46O88174 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd46O88174 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd46O88174 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Cd46O88174 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd46O88174 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd46O88174 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd46O88174 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd46O88174 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd46O88174 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd46O88174 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd46O88174 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms