Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.89■□□□□ 0.61
Ldb2O55203 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.89■□□□□ 0.61
Ldb2O55203 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.89■□□□□ 0.61
Ldb2O55203 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ldb2O55203 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb2O55203 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb2O55203 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ldb2O55203 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb2O55203 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb2O55203 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb2O55203 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ldb2O55203 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.88■□□□□ 0.61
Ldb2O55203 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb2O55203 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb2O55203 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ldb2O55203 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb2O55203 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb2O55203 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb2O55203 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.87■□□□□ 0.61
Ldb2O55203 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb2O55203 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb2O55203 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.87■□□□□ 0.61
Ldb2O55203 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ldb2O55203 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Reep4-203ENSMUST00000226563 1444 ntBASIC18.86■□□□□ 0.61
Ldb2O55203 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Gm9988-201ENSMUST00000069786 435 ntBASIC18.86■□□□□ 0.61
Ldb2O55203 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb2O55203 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ldb2O55203 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.85■□□□□ 0.61
Ldb2O55203 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ldb2O55203 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.85■□□□□ 0.61
Ldb2O55203 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ldb2O55203 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ldb2O55203 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 BC021767-201ENSMUST00000126387 1716 ntBASIC18.85■□□□□ 0.61
Ldb2O55203 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb2O55203 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ldb2O55203 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.84■□□□□ 0.61
Ldb2O55203 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.84■□□□□ 0.61
Ldb2O55203 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ldb2O55203 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ldb2O55203 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Golph3-205ENSMUST00000228671 2842 ntBASIC18.84■□□□□ 0.61
Ldb2O55203 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb2O55203 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ldb2O55203 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.83■□□□□ 0.61
Ldb2O55203 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb2O55203 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Ldb2O55203 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb2O55203 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.83■□□□□ 0.6
Ldb2O55203 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.83■□□□□ 0.6
Ldb2O55203 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.83■□□□□ 0.6
Ldb2O55203 Gm10493-201ENSMUST00000097270 612 ntBASIC18.83■□□□□ 0.6
Ldb2O55203 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb2O55203 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb2O55203 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb2O55203 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.82■□□□□ 0.6
Ldb2O55203 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.82■□□□□ 0.6
Ldb2O55203 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.82■□□□□ 0.6
Ldb2O55203 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.82■□□□□ 0.6
Ldb2O55203 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms