Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pja1O55176 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pja1O55176 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pja1O55176 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.03■□□□□ 0.8
Pja1O55176 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.03■□□□□ 0.8
Pja1O55176 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.03■□□□□ 0.8
Pja1O55176 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pja1O55176 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.03■□□□□ 0.8
Pja1O55176 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pja1O55176 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.03■□□□□ 0.8
Pja1O55176 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pja1O55176 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pja1O55176 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.02■□□□□ 0.8
Pja1O55176 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.02■□□□□ 0.8
Pja1O55176 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pja1O55176 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.02■□□□□ 0.8
Pja1O55176 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Pja1O55176 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pja1O55176 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pja1O55176 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pja1O55176 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pja1O55176 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pja1O55176 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pja1O55176 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pja1O55176 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pja1O55176 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pja1O55176 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pja1O55176 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pja1O55176 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
Pja1O55176 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pja1O55176 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20■□□□□ 0.79
Pja1O55176 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pja1O55176 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pja1O55176 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pja1O55176 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.99■□□□□ 0.79
Pja1O55176 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Pja1O55176 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Gm12251-201ENSMUST00000117893 792 ntBASIC19.99■□□□□ 0.79
Pja1O55176 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.99■□□□□ 0.79
Pja1O55176 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.99■□□□□ 0.79
Pja1O55176 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pja1O55176 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pja1O55176 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.99■□□□□ 0.79
Pja1O55176 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pja1O55176 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Pja1O55176 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.98■□□□□ 0.79
Pja1O55176 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.98■□□□□ 0.79
Pja1O55176 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.98■□□□□ 0.79
Pja1O55176 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.98■□□□□ 0.79
Pja1O55176 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pja1O55176 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pja1O55176 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pja1O55176 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.98■□□□□ 0.79
Pja1O55176 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.98■□□□□ 0.79
Pja1O55176 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.97■□□□□ 0.79
Pja1O55176 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.97■□□□□ 0.79
Pja1O55176 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.97■□□□□ 0.79
Pja1O55176 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.97■□□□□ 0.79
Pja1O55176 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pja1O55176 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms