Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Banf1O54962 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Banf1O54962 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Banf1O54962 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.29■□□□□ 0.68
Banf1O54962 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Banf1O54962 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.29■□□□□ 0.68
Banf1O54962 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Banf1O54962 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Banf1O54962 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Banf1O54962 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Banf1O54962 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.28■□□□□ 0.68
Banf1O54962 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Banf1O54962 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Banf1O54962 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Banf1O54962 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Banf1O54962 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Banf1O54962 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Banf1O54962 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Banf1O54962 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Banf1O54962 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Banf1O54962 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.27■□□□□ 0.68
Banf1O54962 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Banf1O54962 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Banf1O54962 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Banf1O54962 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Banf1O54962 Rarb-207ENSMUST00000225921 2756 ntBASIC19.27■□□□□ 0.67
Banf1O54962 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Banf1O54962 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Banf1O54962 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Banf1O54962 Gm21956-201ENSMUST00000179946 522 ntBASIC19.26■□□□□ 0.67
Banf1O54962 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Banf1O54962 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Banf1O54962 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Banf1O54962 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Banf1O54962 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.25■□□□□ 0.67
Banf1O54962 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Banf1O54962 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.25■□□□□ 0.67
Banf1O54962 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Banf1O54962 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Banf1O54962 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Banf1O54962 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Banf1O54962 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Banf1O54962 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Banf1O54962 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Banf1O54962 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.24■□□□□ 0.67
Banf1O54962 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Banf1O54962 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.24■□□□□ 0.67
Banf1O54962 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Banf1O54962 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.24■□□□□ 0.67
Banf1O54962 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.24■□□□□ 0.67
Banf1O54962 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.24■□□□□ 0.67
Banf1O54962 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Banf1O54962 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.24■□□□□ 0.67
Banf1O54962 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Banf1O54962 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Banf1O54962 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
Banf1O54962 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Banf1O54962 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.23■□□□□ 0.67
Banf1O54962 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.23■□□□□ 0.67
Banf1O54962 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Banf1O54962 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Banf1O54962 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Banf1O54962 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Banf1O54962 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.23■□□□□ 0.67
Banf1O54962 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.22■□□□□ 0.67
Banf1O54962 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Banf1O54962 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Banf1O54962 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Banf1O54962 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Banf1O54962 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Banf1O54962 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.21■□□□□ 0.67
Banf1O54962 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Banf1O54962 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.21■□□□□ 0.67
Banf1O54962 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Banf1O54962 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms