Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Per2O54943 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Per2O54943 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Per2O54943 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Per2O54943 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Per2O54943 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Per2O54943 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.74■□□□□ 0.75
Per2O54943 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.74■□□□□ 0.75
Per2O54943 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Per2O54943 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Per2O54943 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Per2O54943 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Per2O54943 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Per2O54943 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Per2O54943 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Per2O54943 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.73■□□□□ 0.75
Per2O54943 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Per2O54943 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.73■□□□□ 0.75
Per2O54943 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Per2O54943 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Per2O54943 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.72■□□□□ 0.75
Per2O54943 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Per2O54943 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.72■□□□□ 0.75
Per2O54943 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Per2O54943 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Golph3-205ENSMUST00000228671 2842 ntBASIC19.71■□□□□ 0.75
Per2O54943 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Per2O54943 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.71■□□□□ 0.75
Per2O54943 Gm7860-201ENSMUST00000121190 879 ntBASIC19.71■□□□□ 0.75
Per2O54943 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Per2O54943 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.71■□□□□ 0.75
Per2O54943 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.71■□□□□ 0.75
Per2O54943 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
Per2O54943 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Per2O54943 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Per2O54943 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Per2O54943 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Per2O54943 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Per2O54943 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.69■□□□□ 0.74
Per2O54943 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Per2O54943 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.69■□□□□ 0.74
Per2O54943 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.69■□□□□ 0.74
Per2O54943 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Per2O54943 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Per2O54943 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Per2O54943 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Per2O54943 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.69■□□□□ 0.74
Per2O54943 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Per2O54943 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Per2O54943 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Per2O54943 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.69■□□□□ 0.74
Per2O54943 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms