Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clk3O35492 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clk3O35492 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clk3O35492 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clk3O35492 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.98■□□□□ 0.47
Clk3O35492 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Clk3O35492 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Clk3O35492 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.98■□□□□ 0.47
Clk3O35492 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clk3O35492 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk3O35492 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.98■□□□□ 0.47
Clk3O35492 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clk3O35492 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
Clk3O35492 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.97■□□□□ 0.47
Clk3O35492 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.97■□□□□ 0.47
Clk3O35492 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
Clk3O35492 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clk3O35492 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk3O35492 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Clk3O35492 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Clk3O35492 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Clk3O35492 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.96■□□□□ 0.47
Clk3O35492 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Clk3O35492 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk3O35492 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Clk3O35492 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
Clk3O35492 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Clk3O35492 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk3O35492 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.94■□□□□ 0.46
Clk3O35492 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.94■□□□□ 0.46
Clk3O35492 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clk3O35492 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Clk3O35492 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Clk3O35492 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk3O35492 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clk3O35492 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Clk3O35492 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clk3O35492 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Clk3O35492 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk3O35492 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.92■□□□□ 0.46
Clk3O35492 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.92■□□□□ 0.46
Clk3O35492 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Clk3O35492 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms