Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.71■□□□□ 0.91
Clk2O35491 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clk2O35491 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Clk2O35491 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.7■□□□□ 0.9
Clk2O35491 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.7■□□□□ 0.9
Clk2O35491 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Clk2O35491 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.7■□□□□ 0.9
Clk2O35491 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.7■□□□□ 0.9
Clk2O35491 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clk2O35491 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Clk2O35491 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Clk2O35491 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.69■□□□□ 0.9
Clk2O35491 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clk2O35491 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.69■□□□□ 0.9
Clk2O35491 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clk2O35491 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clk2O35491 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clk2O35491 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clk2O35491 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clk2O35491 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clk2O35491 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clk2O35491 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Clk2O35491 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Clk2O35491 Gm27011-201ENSMUST00000182352 972 ntBASIC20.68■□□□□ 0.9
Clk2O35491 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.68■□□□□ 0.9
Clk2O35491 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Clk2O35491 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clk2O35491 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Clk2O35491 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Clk2O35491 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.67■□□□□ 0.9
Clk2O35491 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Clk2O35491 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clk2O35491 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clk2O35491 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.66■□□□□ 0.9
Clk2O35491 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clk2O35491 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.66■□□□□ 0.9
Clk2O35491 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
Clk2O35491 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clk2O35491 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clk2O35491 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Clk2O35491 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Clk2O35491 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Clk2O35491 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.65■□□□□ 0.9
Clk2O35491 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clk2O35491 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.65■□□□□ 0.9
Clk2O35491 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms