Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.96□□□□□ -0.01
Efnb3O35393 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.96□□□□□ -0.01
Efnb3O35393 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Efnb3O35393 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Efnb3O35393 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Efnb3O35393 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Efnb3O35393 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Efnb3O35393 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Efnb3O35393 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Efnb3O35393 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Efnb3O35393 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Efnb3O35393 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.96□□□□□ -0.01
Efnb3O35393 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.96□□□□□ -0.01
Efnb3O35393 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Efnb3O35393 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Efnb3O35393 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Efnb3O35393 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.95□□□□□ -0.02
Efnb3O35393 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.95□□□□□ -0.02
Efnb3O35393 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Efnb3O35393 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.95□□□□□ -0.02
Efnb3O35393 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.95□□□□□ -0.02
Efnb3O35393 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Efnb3O35393 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Efnb3O35393 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.95□□□□□ -0.02
Efnb3O35393 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Efnb3O35393 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Efnb3O35393 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.94□□□□□ -0.02
Efnb3O35393 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Efnb3O35393 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Efnb3O35393 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.94□□□□□ -0.02
Efnb3O35393 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.94□□□□□ -0.02
Efnb3O35393 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Efnb3O35393 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.94□□□□□ -0.02
Efnb3O35393 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Efnb3O35393 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.93□□□□□ -0.02
Efnb3O35393 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Efnb3O35393 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.93□□□□□ -0.02
Efnb3O35393 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.93□□□□□ -0.02
Efnb3O35393 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Efnb3O35393 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Efnb3O35393 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Efnb3O35393 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Efnb3O35393 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.92□□□□□ -0.02
Efnb3O35393 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Efnb3O35393 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.92□□□□□ -0.02
Efnb3O35393 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Efnb3O35393 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms