Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Capn1O35350 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Capn1O35350 Gm12933-201ENSMUST00000120203 872 ntBASIC17.5■□□□□ 0.39
Capn1O35350 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.5■□□□□ 0.39
Capn1O35350 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn1O35350 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.49■□□□□ 0.39
Capn1O35350 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.49■□□□□ 0.39
Capn1O35350 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Capn1O35350 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Capn1O35350 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Capn1O35350 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.48■□□□□ 0.39
Capn1O35350 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Capn1O35350 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.48■□□□□ 0.39
Capn1O35350 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.48■□□□□ 0.39
Capn1O35350 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Capn1O35350 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.48■□□□□ 0.39
Capn1O35350 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Capn1O35350 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Capn1O35350 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Capn1O35350 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Capn1O35350 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.47■□□□□ 0.39
Capn1O35350 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.47■□□□□ 0.39
Capn1O35350 Gm10602-201ENSMUST00000098239 609 ntBASIC17.47■□□□□ 0.39
Capn1O35350 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capn1O35350 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capn1O35350 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Capn1O35350 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Capn1O35350 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Capn1O35350 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Capn1O35350 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Capn1O35350 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Capn1O35350 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Capn1O35350 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.46■□□□□ 0.39
Capn1O35350 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Capn1O35350 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Capn1O35350 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.45■□□□□ 0.38
Capn1O35350 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Gm27011-201ENSMUST00000182352 972 ntBASIC17.45■□□□□ 0.38
Capn1O35350 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.45■□□□□ 0.38
Capn1O35350 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Capn1O35350 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.45■□□□□ 0.38
Capn1O35350 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Gm7514-201ENSMUST00000209475 934 ntBASIC17.45■□□□□ 0.38
Capn1O35350 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.45■□□□□ 0.38
Capn1O35350 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Capn1O35350 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Capn1O35350 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.44■□□□□ 0.38
Capn1O35350 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Capn1O35350 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.43■□□□□ 0.38
Capn1O35350 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.43■□□□□ 0.38
Capn1O35350 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Capn1O35350 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.43■□□□□ 0.38
Capn1O35350 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Capn1O35350 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Capn1O35350 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms