Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.83
Cpsf2O35218 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.2■□□□□ 0.82
Cpsf2O35218 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.2■□□□□ 0.82
Cpsf2O35218 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf2O35218 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cpsf2O35218 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.2■□□□□ 0.82
Cpsf2O35218 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Cpsf2O35218 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf2O35218 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.18■□□□□ 0.82
Cpsf2O35218 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.18■□□□□ 0.82
Cpsf2O35218 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cpsf2O35218 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf2O35218 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Cpsf2O35218 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf2O35218 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf2O35218 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.17■□□□□ 0.82
Cpsf2O35218 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf2O35218 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf2O35218 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cpsf2O35218 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.16■□□□□ 0.82
Cpsf2O35218 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cpsf2O35218 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cpsf2O35218 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.16■□□□□ 0.82
Cpsf2O35218 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cpsf2O35218 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf2O35218 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf2O35218 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cpsf2O35218 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf2O35218 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf2O35218 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf2O35218 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf2O35218 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cpsf2O35218 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cpsf2O35218 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf2O35218 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cpsf2O35218 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.14■□□□□ 0.82
Cpsf2O35218 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cpsf2O35218 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.14■□□□□ 0.81
Cpsf2O35218 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.14■□□□□ 0.81
Cpsf2O35218 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Cpsf2O35218 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.14■□□□□ 0.81
Cpsf2O35218 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.14■□□□□ 0.81
Cpsf2O35218 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cpsf2O35218 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf2O35218 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cpsf2O35218 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpsf2O35218 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpsf2O35218 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms