Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc4a9E9PUP3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Slc4a9E9PUP3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.14■■□□□ 1.14
Slc4a9E9PUP3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Slc4a9E9PUP3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc4a9E9PUP3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc4a9E9PUP3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Gm11539-201ENSMUST00000119837 557 ntBASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Gm13436-201ENSMUST00000120418 567 ntBASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.12■■□□□ 1.13
Slc4a9E9PUP3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Gm7889-201ENSMUST00000185591 958 ntBASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc4a9E9PUP3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Gm18101-201ENSMUST00000215769 548 ntBASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc4a9E9PUP3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.09■■□□□ 1.13
Slc4a9E9PUP3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.09■■□□□ 1.13
Slc4a9E9PUP3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc4a9E9PUP3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.09■■□□□ 1.13
Slc4a9E9PUP3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc4a9E9PUP3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc4a9E9PUP3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Slc4a9E9PUP3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc4a9E9PUP3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Slc4a9E9PUP3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Slc4a9E9PUP3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Slc4a9E9PUP3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms