Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim30cD3YVI9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Trim30cD3YVI9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.58■□□□□ 0.89
Trim30cD3YVI9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trim30cD3YVI9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim30cD3YVI9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim30cD3YVI9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim30cD3YVI9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30cD3YVI9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30cD3YVI9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30cD3YVI9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30cD3YVI9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30cD3YVI9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim30cD3YVI9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms