Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ptchd4B9EKX1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd4B9EKX1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd4B9EKX1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd4B9EKX1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd4B9EKX1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Trmt13-210ENSMUST00000198454 880 ntBASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd4B9EKX1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ptchd4B9EKX1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms