Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gm11127A7VMS2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11127A7VMS2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Gm45102-201ENSMUST00000207427 857 ntBASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gm11127A7VMS2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Gm11127A7VMS2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11127A7VMS2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Gm11127A7VMS2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
Gm11127A7VMS2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11127A7VMS2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms